wmtk::components::internal Namespace Reference

Classes
struct	bbox
class	Segment
struct	EdgeInsOptions
struct	ExportCacheOptions
struct	GetAllMeshesOptions
struct	ImportCacheOptions
struct	MeshInfoOptions
class	MultiMeshFromTag
	This class generates a multi-mesh from a mesh where the substructure is represented by a tag. More...
class	TagAttribute
class	RegularSpace
struct	RegularSpaceOptions
struct	TagIntersectionAttributes
struct	TagIntersectionValues
struct	TagIntersectionOptions
struct	WindingNumberOptions

Functions
std::shared_ptr< wmtk::TetMesh >	CDT_internal (const wmtk::TriMesh &m, std::vector< std::array< bool, 4 >> &local_f_on_input, bool inner_only, bool rational_output)
std::tuple< std::pair< std::vector< double >, uint32_t >, std::pair< std::vector< uint32_t >, uint32_t > >	get_vf (const TriMesh &trimesh)
std::tuple< Eigen::MatrixXd, Eigen::MatrixXi >	delaunay_2d (Eigen::Ref< const RowVectors2d > points)
std::tuple< Eigen::MatrixXd, Eigen::MatrixXi >	delaunay_3d (Eigen::Ref< const RowVectors3d > points)
std::tuple< Eigen::MatrixXd, Eigen::MatrixXi >	delaunay_geogram (Eigen::Ref< const Eigen::MatrixXd > points)
wmtk::Rational	det (const wmtk::Vector2r &a, const wmtk::Vector2r &b)
int	is_point_inside_triangle (const wmtk::Vector2r &P, const wmtk::Vector2r &A, const wmtk::Vector2r &B, const wmtk::Vector2r &C)
bool	segment_segment_inter (const Vector2r &s0, const Vector2r &e0, const Vector2r &s1, const Vector2r &e1, Vector2r &res, Rational &t0, Rational &t1)
bool	is_point_in_bbox (const Vector2r &point, const Vector2r &bbox_min, const Vector2r &bbox_max)
bool	is_bbox_intersect (const Vector2r &bbox_min_0, const Vector2r &bbox_max_0, const Vector2r &bbox_min_1, const Vector2r &bbox_max_1)
std::array< wmtk::Vector2r, 2 >	compute_bbox (const wmtk::Vector2r &p0, const wmtk::Vector2r &p1, const wmtk::Vector2r &p2)
std::array< wmtk::Vector2r, 2 >	compute_bbox (const wmtk::Vector2r &p0, const wmtk::Vector2r &p1)
bool	is_colinear (const Vector2r &p0, const Vector2r &p1, const Vector2r &q0, const Vector2r &q1)
std::vector< int64_t >	cyclic_order (const std::vector< Vector2r > &V)
void	dfs_triangulate_aux (int64_t v, std::vector< std::vector< std::tuple< int64_t, bool, bool >>> &VV, std::vector< Vector2r > &V_pos, std::vector< int64_t > &stack, std::vector< int > &in_stack, std::vector< int > &is_on_input, std::vector< int > &is_used, std::vector< std::vector< int64_t >> &in_stack_idx, const Vector2r &prev_vector, const int64_t v_prev, std::vector< std::array< int64_t, 3 >> &FV, std::vector< std::array< int, 3 >> &local_e_on_input)
void	dfs_triangulate (std::vector< std::vector< std::tuple< int64_t, bool, bool >>> &VV, std::vector< Vector2r > &V_pos, std::vector< std::array< int64_t, 3 >> &FV, std::vector< std::array< int, 3 >> &local_e_on_input)
void	edge_insertion (TriMesh &_trimesh, EdgeMesh &edgemesh, std::vector< Vector2r > &v_final, std::vector< std::array< int64_t, 3 >> &FV_new, std::vector< std::array< int, 3 >> &local_e_on_input)
bool	segment_segment_inter (const Vector2r &s0, const Vector2r &e0, const Vector2r &s1, const Vector2r &e1, Vector2r &res)
	include the intersection on edgepoints More...
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (EdgeInsOptions, edges, triangles, output)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (ExportCacheOptions, folder)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (GetAllMeshesOptions, input, name)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (ImportCacheOptions, folder)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (MeshInfoOptions, input)
void	write (const Mesh &mesh, const std::string &out_dir, const std::string &name, const std::string &vname, const int64_t index, const bool intermediate_output)
void	adjust_sizing_field (Mesh &m, const TypedAttributeHandle< double > &coordinate_handle, const TypedAttributeHandle< double > &edge_length_handle, const TypedAttributeHandle< double > &sizing_field_scalar_handle, const TypedAttributeHandle< double > &energy_handle, const TypedAttributeHandle< double > &target_edge_length_handle, const TypedAttributeHandle< char > &visited_handle, const double stop_energy, const double current_max_energy, const double initial_target_edge_length, const double min_target_edge_length)
void	set_operation_energy_filter (Mesh &m, const TypedAttributeHandle< double > &coordinate_handle, const TypedAttributeHandle< double > &energy_handle, const TypedAttributeHandle< char > &energy_filter_handle, const TypedAttributeHandle< char > &visited_handle, const double stop_energy, const double current_max_energy, const double initial_target_edge_length)
void	periodic_optimization (Mesh &periodic_mesh, Mesh &position_mesh, Mesh &surface_mesh, const double target_edge_length, const double max_amips_energy, const int64_t passes, const double envelope_size, const bool intermediate_output, std::vector< attribute::MeshAttributeHandle > &pass_through_attributes, std::string output_dir, std::string output)
void	to_json (nlohmann::json &j, RegularSpaceOptions &o)
void	from_json (const nlohmann::json &j, RegularSpaceOptions &o)
void	to_json (nlohmann::json &j, TagIntersectionOptions &o)
void	from_json (const nlohmann::json &j, TagIntersectionOptions &o)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (TagIntersectionAttributes, vertex_labels, edge_labels, face_labels, tetrahedron_labels)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (TagIntersectionValues, vertex_values, edge_values, face_values, tetrahedron_values)
std::vector< std::pair< std::shared_ptr< Mesh >, std::string > >	wildmeshing2d (const WildMeshingOptions &options)
std::vector< std::pair< std::shared_ptr< Mesh >, std::string > >	wildmeshing3d (const WildMeshingOptions &options)
void	adjust_sizing_field (Mesh &m, const TypedAttributeHandle< Rational > &coordinate_handle, const TypedAttributeHandle< double > &edge_length_handle, const TypedAttributeHandle< double > &sizing_field_scalar_handle, const TypedAttributeHandle< double > &energy_handle, const TypedAttributeHandle< double > &target_edge_length_handle, const TypedAttributeHandle< char > &visited_handle, const double stop_energy, const double current_max_energy, const double initial_target_edge_length, const double min_target_edge_length)
void	set_operation_energy_filter (Mesh &m, const TypedAttributeHandle< Rational > &coordinate_handle, const TypedAttributeHandle< double > &energy_handle, const TypedAttributeHandle< char > &energy_filter_handle, const TypedAttributeHandle< char > &visited_handle, const double stop_energy, const double current_max_energy, const double initial_target_edge_length)
void	set_operation_energy_filter_after_sizing_field (Mesh &m, const TypedAttributeHandle< Rational > &coordinate_handle, const TypedAttributeHandle< double > &energy_handle, const TypedAttributeHandle< char > &energy_filter_handle, const TypedAttributeHandle< char > &visited_handle, const double stop_energy, const double current_max_energy, const double initial_target_edge_length)
void	write (const std::shared_ptr< Mesh > &mesh, const std::string &out_dir, const std::string &name, const std::string &vname, const int64_t index, const bool intermediate_output)
Eigen::VectorXd	winding_number (const Mesh &m, const TriMesh &surface)
Eigen::VectorXd	winding_number_internal (const Eigen::MatrixXd &query_points, const Eigen::MatrixXd &surface_V, const MatrixX< int64_t > &surface_F)
	NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE (WindingNumberOptions, input, filtering_base, output, threshold)

Function Documentation

adjust_sizing_field() [1/2]

void wmtk::components::internal::adjust_sizing_field	(	Mesh &	m,
		const TypedAttributeHandle< double > &	coordinate_handle,
		const TypedAttributeHandle< double > &	edge_length_handle,
		const TypedAttributeHandle< double > &	sizing_field_scalar_handle,
		const TypedAttributeHandle< double > &	energy_handle,
		const TypedAttributeHandle< double > &	target_edge_length_handle,
		const TypedAttributeHandle< char > &	visited_handle,
		const double	stop_energy,
		const double	current_max_energy,
		const double	initial_target_edge_length,
		const double	min_target_edge_length
	)

Definition at line 1185 of file periodic_optimization.cpp.

References wmtk::Mesh::create_accessor(), wmtk::Mesh::create_const_accessor(), wmtk::Edge, wmtk::Mesh::get_all(), wmtk::simplex::link(), wmtk::logger(), wmtk::Mesh::orient_vertices(), wmtk::Mesh::switch_tuple(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Vertex, wmtk::simplex::Simplex::vertex(), and wmtk::simplex::vertices().

Referenced by periodic_optimization(), and wildmeshing3d().

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adjust_sizing_field() [2/2]

void wmtk::components::internal::adjust_sizing_field	(	Mesh &	m,
		const TypedAttributeHandle< Rational > &	coordinate_handle,
		const TypedAttributeHandle< double > &	edge_length_handle,
		const TypedAttributeHandle< double > &	sizing_field_scalar_handle,
		const TypedAttributeHandle< double > &	energy_handle,
		const TypedAttributeHandle< double > &	target_edge_length_handle,
		const TypedAttributeHandle< char > &	visited_handle,
		const double	stop_energy,
		const double	current_max_energy,
		const double	initial_target_edge_length,
		const double	min_target_edge_length
	)

Definition at line 1507 of file wildmeshing3d.cpp.

References wmtk::Mesh::create_accessor(), wmtk::Mesh::create_const_accessor(), wmtk::Edge, wmtk::Mesh::get_all(), wmtk::simplex::link(), wmtk::logger(), wmtk::Mesh::orient_vertices(), wmtk::Mesh::switch_tuple(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Vertex, wmtk::simplex::Simplex::vertex(), and wmtk::simplex::vertices().

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CDT_internal()

std::shared_ptr< wmtk::TetMesh > wmtk::components::internal::CDT_internal	(	const wmtk::TriMesh &	m,
		std::vector< std::array< bool, 4 >> &	local_f_on_input,
		bool	inner_only,
		bool	rational_output
	)

Definition at line 18 of file CDT.cpp.

References cdt_lib::cdt_to_string(), get_vf(), wmtk::logger(), wmtk::Scheduler::run_operation_on_all(), wmtk::mesh_utils::set_matrix_attribute(), wmtk::Vertex, and wmtk::utils::wmtk_orient3d().

Referenced by wmtk::components::CDT().

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compute_bbox() [1/2]

std::array<wmtk::Vector2r, 2> wmtk::components::internal::compute_bbox	(	const wmtk::Vector2r &	p0,
		const wmtk::Vector2r &	p1
	)

Definition at line 190 of file edge_insertion.cpp.

compute_bbox() [2/2]

std::array<wmtk::Vector2r, 2> wmtk::components::internal::compute_bbox	(	const wmtk::Vector2r &	p0,
		const wmtk::Vector2r &	p1,
		const wmtk::Vector2r &	p2
	)

Definition at line 163 of file edge_insertion.cpp.

Referenced by edge_insertion().

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cyclic_order()

std::vector<int64_t> wmtk::components::internal::cyclic_order

(

const std::vector< Vector2r > &

V

)

Definition at line 221 of file edge_insertion.cpp.

Referenced by dfs_triangulate_aux().

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delaunay_2d()

std::tuple< Eigen::MatrixXd, Eigen::MatrixXi > wmtk::components::internal::delaunay_2d

(

Eigen::Ref< const RowVectors2d >

points

)

Definition at line 8 of file delaunay_2d.cpp.

References delaunay_geogram().

Referenced by wmtk::components::delaunay_exec(), and TEST_CASE().

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delaunay_3d()

std::tuple< Eigen::MatrixXd, Eigen::MatrixXi > wmtk::components::internal::delaunay_3d

(

Eigen::Ref< const RowVectors3d >

points

)

Definition at line 7 of file delaunay_3d.cpp.

References delaunay_geogram().

Referenced by wmtk::components::delaunay_exec(), and TEST_CASE().

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delaunay_geogram()

std::tuple< Eigen::MatrixXd, Eigen::MatrixXi > wmtk::components::internal::delaunay_geogram

(

Eigen::Ref< const Eigen::MatrixXd >

points

)

Definition at line 11 of file delaunay_geogram.cpp.

References wmtk::logger(), and wmtk::simplex::vertices().

Referenced by delaunay_2d(), delaunay_3d(), and TEST_CASE().

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det()

wmtk::Rational wmtk::components::internal::det	(	const wmtk::Vector2r &	a,
		const wmtk::Vector2r &	b
	)

Definition at line 27 of file edge_insertion.cpp.

Referenced by is_point_inside_triangle(), wmtk::utils::wmtk_orient2d(), and wmtk::utils::wmtk_orient3d().

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dfs_triangulate()

void wmtk::components::internal::dfs_triangulate	(	std::vector< std::vector< std::tuple< int64_t, bool, bool >>> &	VV,
		std::vector< Vector2r > &	V_pos,
		std::vector< std::array< int64_t, 3 >> &	FV,
		std::vector< std::array< int, 3 >> &	local_e_on_input
	)

Definition at line 431 of file edge_insertion.cpp.

References dfs_triangulate_aux().

Referenced by edge_insertion().

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dfs_triangulate_aux()

void wmtk::components::internal::dfs_triangulate_aux	(	int64_t	v,
		std::vector< std::vector< std::tuple< int64_t, bool, bool >>> &	VV,
		std::vector< Vector2r > &	V_pos,
		std::vector< int64_t > &	stack,
		std::vector< int > &	in_stack,
		std::vector< int > &	is_on_input,
		std::vector< int > &	is_used,
		std::vector< std::vector< int64_t >> &	in_stack_idx,
		const Vector2r &	prev_vector,
		const int64_t	v_prev,
		std::vector< std::array< int64_t, 3 >> &	FV,
		std::vector< std::array< int, 3 >> &	local_e_on_input
	)

Definition at line 259 of file edge_insertion.cpp.

References cyclic_order().

Referenced by dfs_triangulate().

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edge_insertion()

void wmtk::components::internal::edge_insertion	(	TriMesh &	_trimesh,
		EdgeMesh &	edgemesh,
		std::vector< Vector2r > &	v_final,
		std::vector< std::array< int64_t, 3 >> &	FV_new,
		std::vector< std::array< int, 3 >> &	local_e_on_input
	)

Definition at line 483 of file edge_insertion.cpp.

References wmtk::components::internal::Segment::bbox_max, wmtk::components::internal::Segment::bbox_min, wmtk::operations::composite::TriFaceSplit::collapse(), compute_bbox(), wmtk::Mesh::consolidate(), wmtk::operations::CopyOther, wmtk::MeshCRTP< Derived >::create_accessor(), dfs_triangulate(), wmtk::Edge, wmtk::simplex::Simplex::edge(), wmtk::simplex::edges(), wmtk::simplex::Simplex::face(), wmtk::Mesh::get_all(), wmtk::Mesh::get_attribute_handle(), wmtk::utils::EigenMatrixWriter::get_EV_matrix(), wmtk::utils::EigenMatrixWriter::get_FV_matrix(), wmtk::utils::EigenMatrixWriter::get_position_matrix(), is_bbox_intersect(), wmtk::TriMesh::is_boundary(), is_colinear(), wmtk::components::internal::Segment::is_on_input, is_point_in_bbox(), is_point_inside_triangle(), wmtk::operations::None, wmtk::components::internal::Segment::p0, wmtk::components::internal::Segment::p1, wmtk::components::internal::Segment::points_on_segment, wmtk::Mesh::register_attribute(), segment_segment_inter(), wmtk::Mesh::serialize(), wmtk::operations::EdgeCollapse::set_new_attribute_strategy(), wmtk::operations::EdgeSplit::set_new_attribute_strategy(), wmtk::operations::composite::TriFaceSplit::split(), wmtk::TriMesh::switch_tuple(), wmtk::MeshCRTP< Derived >::switch_tuples(), wmtk::Triangle, and wmtk::Vertex.

Referenced by wmtk::components::edge_insertion().

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from_json() [1/2]

void wmtk::components::internal::from_json	(	const nlohmann::json &	j,
		RegularSpaceOptions &	o
	)

Definition at line 17 of file RegularSpaceOptions.cpp.

References wmtk::components::internal::RegularSpaceOptions::attributes, wmtk::components::internal::RegularSpaceOptions::input, wmtk::log_and_throw_error(), wmtk::components::internal::RegularSpaceOptions::output, wmtk::components::internal::RegularSpaceOptions::pass_through, and wmtk::components::internal::RegularSpaceOptions::values.

Referenced by wmtk::components::isotropic_remeshing::IsotropicRemeshingOptions::load_json().

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from_json() [2/2]

void wmtk::components::internal::from_json	(	const nlohmann::json &	j,
		TagIntersectionOptions &	o
	)

Definition at line 19 of file TagIntersectionOptions.cpp.

References wmtk::components::internal::TagIntersectionOptions::attributes, wmtk::components::internal::TagIntersectionAttributes::edge_labels, wmtk::components::internal::TagIntersectionValues::edge_values, wmtk::components::internal::TagIntersectionAttributes::face_labels, wmtk::components::internal::TagIntersectionValues::face_values, wmtk::components::internal::TagIntersectionOptions::input, wmtk::log_and_throw_error(), wmtk::components::internal::TagIntersectionOptions::output, wmtk::components::internal::TagIntersectionOptions::output_attributes, wmtk::components::internal::TagIntersectionOptions::output_values, wmtk::components::internal::TagIntersectionOptions::pass_through, wmtk::components::internal::TagIntersectionAttributes::tetrahedron_labels, wmtk::components::internal::TagIntersectionValues::tetrahedron_values, wmtk::components::internal::TagIntersectionOptions::values, wmtk::components::internal::TagIntersectionAttributes::vertex_labels, and wmtk::components::internal::TagIntersectionValues::vertex_values.

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get_vf()

std::tuple< std::pair< std::vector< double >, uint32_t >, std::pair< std::vector< uint32_t >, uint32_t > > wmtk::components::internal::get_vf

(

const TriMesh &

trimesh

)

Definition at line 9 of file get_vf.cpp.

References wmtk::utils::EigenMatrixWriter::get_FV_matrix(), wmtk::utils::EigenMatrixWriter::get_position_matrix(), wmtk::logger(), and wmtk::Mesh::serialize().

Referenced by CDT_internal().

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is_bbox_intersect()

bool wmtk::components::internal::is_bbox_intersect	(	const Vector2r &	bbox_min_0,
		const Vector2r &	bbox_max_0,
		const Vector2r &	bbox_min_1,
		const Vector2r &	bbox_max_1
	)

Definition at line 147 of file edge_insertion.cpp.

Referenced by edge_insertion().

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is_colinear()

bool wmtk::components::internal::is_colinear	(	const Vector2r &	p0,
		const Vector2r &	p1,
		const Vector2r &	q0,
		const Vector2r &	q1
	)

Definition at line 212 of file edge_insertion.cpp.

References wmtk::utils::wmtk_orient2d().

Referenced by edge_insertion().

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is_point_in_bbox()

bool wmtk::components::internal::is_point_in_bbox	(	const Vector2r &	point,
		const Vector2r &	bbox_min,
		const Vector2r &	bbox_max
	)

Definition at line 138 of file edge_insertion.cpp.

Referenced by edge_insertion().

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is_point_inside_triangle()

int wmtk::components::internal::is_point_inside_triangle	(	const wmtk::Vector2r &	P,
		const wmtk::Vector2r &	A,
		const wmtk::Vector2r &	B,
		const wmtk::Vector2r &	C
	)

Parameters

point
t1
t2
t3

Returns

int -1: outside 0: inside 1: on AB 2: on BC 3: on AC 4:on A 5: on B 6:on C

Definition at line 32 of file edge_insertion.cpp.

References wmtk::abs(), and det().

Referenced by edge_insertion().

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NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [1/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	EdgeInsOptions	,
		edges	,
		triangles	,
		output
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [2/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	ExportCacheOptions	,
		folder
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [3/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	GetAllMeshesOptions	,
		input	,
		name
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [4/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	ImportCacheOptions	,
		folder
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [5/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	MeshInfoOptions	,
		input
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [6/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	TagIntersectionAttributes	,
		vertex_labels	,
		edge_labels	,
		face_labels	,
		tetrahedron_labels
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [7/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	TagIntersectionValues	,
		vertex_values	,
		edge_values	,
		face_values	,
		tetrahedron_values
	)

NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE() [8/8]

wmtk::components::internal::NLOHMANN_DEFINE_TYPE_NON_INTRUSIVE	(	WindingNumberOptions	,
		input	,
		filtering_base	,
		output	,
		threshold
	)

periodic_optimization()

void wmtk::components::internal::periodic_optimization	(	Mesh &	periodic_mesh,
		Mesh &	position_mesh,
		Mesh &	surface_mesh,
		const double	target_edge_length,
		const double	max_amips_energy,
		const int64_t	passes,
		const double	envelope_size,
		const bool	intermediate_output,
		std::vector< attribute::MeshAttributeHandle > &	pass_through_attributes,
		std::string	output_dir,
		std::string	output
	)

Definition at line 112 of file periodic_optimization.cpp.

References adjust_sizing_field(), wmtk::function::utils::amips(), wmtk::SchedulerStats::collecting_time, wmtk::multimesh::consolidate(), wmtk::operations::Copy, wmtk::Mesh::create_accessor(), wmtk::Mesh::create_const_accessor(), wmtk::Edge, wmtk::SchedulerStats::executing_time, wmtk::Mesh::get_all(), wmtk::Mesh::get_attribute_handle(), wmtk::simplex::link_condition(), wmtk::logger(), wmtk::operations::Mean, wmtk::operations::None, wmtk::SchedulerStats::number_of_failed_operations(), wmtk::SchedulerStats::number_of_performed_operations(), wmtk::SchedulerStats::number_of_successful_operations(), wmtk::Mesh::orient_vertices(), wmtk::components::output::output(), wmtk::PE, PF, PT, wmtk::PV, wmtk::Mesh::register_attribute(), wmtk::Scheduler::run_operation_on_all(), wmtk::SchedulerStats::sorting_time, wmtk::Mesh::switch_tuple(), wmtk::Mesh::switch_tuples(), wmtk::function::Tet_AMIPS_energy(), wmtk::function::utils::Tet_AMIPS_energy(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Triangle, wmtk::Vertex, wmtk::simplex::vertices(), wmtk::utils::wmtk_orient3d(), and write().

Referenced by wmtk::components::periodic_optimization().

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segment_segment_inter() [1/2]

bool wmtk::components::internal::segment_segment_inter	(	const Vector2r &	s0,
		const Vector2r &	e0,
		const Vector2r &	s1,
		const Vector2r &	e1,
		Vector2r &	res
	)

include the intersection on edgepoints

segment_segment_inter() [2/2]

bool wmtk::components::internal::segment_segment_inter	(	const Vector2r &	s0,
		const Vector2r &	e0,
		const Vector2r &	s1,
		const Vector2r &	e1,
		Vector2r &	res,
		Rational &	t0,
		Rational &	t1
	)

Definition at line 102 of file edge_insertion.cpp.

References wmtk::Rational::get_sign().

Referenced by edge_insertion().

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set_operation_energy_filter() [1/2]

void wmtk::components::internal::set_operation_energy_filter	(	Mesh &	m,
		const TypedAttributeHandle< double > &	coordinate_handle,
		const TypedAttributeHandle< double > &	energy_handle,
		const TypedAttributeHandle< char > &	energy_filter_handle,
		const TypedAttributeHandle< char > &	visited_handle,
		const double	stop_energy,
		const double	current_max_energy,
		const double	initial_target_edge_length
	)

Definition at line 1323 of file periodic_optimization.cpp.

References wmtk::Mesh::create_accessor(), wmtk::Mesh::create_const_accessor(), wmtk::Mesh::get_all(), wmtk::simplex::k_ring(), wmtk::Mesh::orient_vertices(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Vertex, wmtk::simplex::Simplex::vertex(), and wmtk::simplex::vertices().

Referenced by wildmeshing3d().

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set_operation_energy_filter() [2/2]

void wmtk::components::internal::set_operation_energy_filter	(	Mesh &	m,
		const TypedAttributeHandle< Rational > &	coordinate_handle,
		const TypedAttributeHandle< double > &	energy_handle,
		const TypedAttributeHandle< char > &	energy_filter_handle,
		const TypedAttributeHandle< char > &	visited_handle,
		const double	stop_energy,
		const double	current_max_energy,
		const double	initial_target_edge_length
	)

Definition at line 1645 of file wildmeshing3d.cpp.

References wmtk::Mesh::create_accessor(), wmtk::Mesh::create_const_accessor(), wmtk::Mesh::get_all(), wmtk::simplex::k_ring(), wmtk::Mesh::orient_vertices(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Vertex, wmtk::simplex::Simplex::vertex(), and wmtk::simplex::vertices().

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set_operation_energy_filter_after_sizing_field()

void wmtk::components::internal::set_operation_energy_filter_after_sizing_field	(	Mesh &	m,
		const TypedAttributeHandle< Rational > &	coordinate_handle,
		const TypedAttributeHandle< double > &	energy_handle,
		const TypedAttributeHandle< char > &	energy_filter_handle,
		const TypedAttributeHandle< char > &	visited_handle,
		const double	stop_energy,
		const double	current_max_energy,
		const double	initial_target_edge_length
	)

Definition at line 1692 of file wildmeshing3d.cpp.

References wmtk::Mesh::create_accessor(), wmtk::Mesh::create_const_accessor(), wmtk::Mesh::get_all(), wmtk::simplex::link(), wmtk::Mesh::orient_vertices(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Vertex, wmtk::simplex::Simplex::vertex(), and wmtk::simplex::vertices().

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to_json() [1/2]

void wmtk::components::internal::to_json	(	nlohmann::json &	j,
		RegularSpaceOptions &	o
	)

Definition at line 7 of file RegularSpaceOptions.cpp.

References wmtk::components::internal::RegularSpaceOptions::attributes, wmtk::components::internal::RegularSpaceOptions::input, wmtk::components::internal::RegularSpaceOptions::output, wmtk::components::internal::RegularSpaceOptions::pass_through, and wmtk::components::internal::RegularSpaceOptions::values.

Referenced by wmtk::components::isotropic_remeshing::IsotropicRemeshingOptions::write_json().

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to_json() [2/2]

void wmtk::components::internal::to_json	(	nlohmann::json &	j,
		TagIntersectionOptions &	o
	)

Definition at line 7 of file TagIntersectionOptions.cpp.

References wmtk::components::internal::TagIntersectionOptions::attributes, wmtk::components::internal::TagIntersectionOptions::input, wmtk::components::internal::TagIntersectionOptions::output, wmtk::components::internal::TagIntersectionOptions::output_attributes, wmtk::components::internal::TagIntersectionOptions::output_values, wmtk::components::internal::TagIntersectionOptions::pass_through, and wmtk::components::internal::TagIntersectionOptions::values.

wildmeshing2d()

std::vector< std::pair< std::shared_ptr< Mesh >, std::string > > wmtk::components::internal::wildmeshing2d

(

const WildMeshingOptions &

options

)

Definition at line 85 of file wildmeshing2d.cpp.

References wmtk::operations::Operation::add_invariant(), wmtk::operations::Operation::add_transfer_strategy(), wmtk::function::utils::amips(), wmtk::SchedulerStats::collecting_time, wmtk::multimesh::consolidate(), wmtk::operations::Copy, wmtk::Edge, wmtk::components::WildMeshingOptions::envelopes, wmtk::SchedulerStats::executing_time, wmtk::components::WildMeshingOptions::input_mesh, wmtk::components::WildMeshingOptions::input_mesh_position, wmtk::components::WildMeshingOptions::intermediate_output, wmtk::components::WildMeshingOptions::intermediate_output_name, wmtk::components::WildMeshingOptions::intermediate_output_path, wmtk::simplex::link_condition(), wmtk::logger(), wmtk::operations::attribute_update::make_cast_attribute_transfer_strategy(), wmtk::components::WildMeshingOptions::max_passes, wmtk::operations::Mean, wmtk::operations::None, wmtk::SchedulerStats::number_of_failed_operations(), wmtk::SchedulerStats::number_of_performed_operations(), wmtk::SchedulerStats::number_of_successful_operations(), wmtk::components::WildMeshingOptions::pass_through, wmtk::operations::Operation::primitive_type(), wmtk::components::WildMeshingOptions::replace_double_coordinate, wmtk::Scheduler::run_operation_on_all(), wmtk::components::WildMeshingOptions::scheduler_update_frequency, wmtk::operations::Operation::set_priority(), wmtk::Scheduler::set_update_frequency(), wmtk::components::WildMeshingOptions::skip_collapse, wmtk::components::WildMeshingOptions::skip_smooth, wmtk::components::WildMeshingOptions::skip_split, wmtk::components::WildMeshingOptions::skip_swap, wmtk::SchedulerStats::sorting_time, wmtk::components::WildMeshingOptions::target_edge_length, wmtk::components::WildMeshingOptions::target_max_amips, wmtk::function::Tet_AMIPS_energy(), wmtk::function::Tri_AMIPS_energy(), wmtk::Vertex, wmtk::simplex::Simplex::vertex(), wmtk::simplex::vertices(), wmtk::utils::wmtk_orient2d(), and write().

Referenced by wmtk::components::wildmeshing().

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wildmeshing3d()

std::vector< std::pair< std::shared_ptr< Mesh >, std::string > > wmtk::components::internal::wildmeshing3d

(

const WildMeshingOptions &

options

)

Definition at line 88 of file wildmeshing3d.cpp.

References adjust_sizing_field(), wmtk::function::utils::amips(), wmtk::SchedulerStats::collecting_time, wmtk::multimesh::consolidate(), wmtk::operations::Copy, wmtk::Edge, wmtk::components::WildMeshingOptions::envelopes, wmtk::SchedulerStats::executing_time, wmtk::components::WildMeshingOptions::input_mesh, wmtk::components::WildMeshingOptions::input_mesh_position, wmtk::components::WildMeshingOptions::intermediate_output, wmtk::components::WildMeshingOptions::intermediate_output_name, wmtk::components::WildMeshingOptions::intermediate_output_path, wmtk::simplex::link_condition(), wmtk::logger(), wmtk::operations::attribute_update::make_cast_attribute_transfer_strategy(), wmtk::components::WildMeshingOptions::max_passes, wmtk::operations::Mean, wmtk::operations::None, wmtk::SchedulerStats::number_of_failed_operations(), wmtk::SchedulerStats::number_of_performed_operations(), wmtk::SchedulerStats::number_of_successful_operations(), wmtk::components::WildMeshingOptions::pass_through, wmtk::PE, PF, PT, wmtk::PV, wmtk::components::WildMeshingOptions::replace_double_coordinate, wmtk::Scheduler::run_operation_on_all(), wmtk::components::WildMeshingOptions::scheduler_update_frequency, set_operation_energy_filter(), wmtk::Scheduler::set_update_frequency(), wmtk::components::WildMeshingOptions::skip_collapse, wmtk::components::WildMeshingOptions::skip_smooth, wmtk::components::WildMeshingOptions::skip_split, wmtk::components::WildMeshingOptions::skip_swap, wmtk::SchedulerStats::sorting_time, wmtk::components::WildMeshingOptions::target_edge_length, wmtk::components::WildMeshingOptions::target_max_amips, wmtk::function::Tet_AMIPS_energy(), wmtk::function::utils::Tet_AMIPS_energy(), wmtk::Tetrahedron, wmtk::function::Tri_AMIPS_energy(), wmtk::Triangle, wmtk::Vertex, wmtk::simplex::vertices(), wmtk::utils::wmtk_orient3d(), and write().

Referenced by wmtk::components::wildmeshing().

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winding_number()

Eigen::VectorXd wmtk::components::internal::winding_number	(	const Mesh &	m,
		const TriMesh &	surface
	)

Definition at line 21 of file winding_number.cpp.

References wmtk::Edge, wmtk::utils::EigenMatrixWriter::get_EV_matrix(), wmtk::utils::EigenMatrixWriter::get_FV_matrix(), wmtk::utils::EigenMatrixWriter::get_position_matrix(), wmtk::utils::EigenMatrixWriter::get_TV_matrix(), wmtk::Mesh::serialize(), wmtk::Tetrahedron, wmtk::Mesh::top_simplex_type(), wmtk::Triangle, and winding_number_internal().

Referenced by wmtk::components::winding_number().

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winding_number_internal()

Eigen::VectorXd wmtk::components::internal::winding_number_internal	(	const Eigen::MatrixXd &	query_points,
		const Eigen::MatrixXd &	surface_V,
		const MatrixX< int64_t > &	surface_F
	)

Definition at line 78 of file winding_number.cpp.

Referenced by winding_number().

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write() [1/2]

void wmtk::components::internal::write	(	const Mesh &	mesh,
		const std::string &	out_dir,
		const std::string &	name,
		const std::string &	vname,
		const int64_t	index,
		const bool	intermediate_output
	)

Definition at line 1161 of file periodic_optimization.cpp.

References data_dir, and wmtk::Mesh::serialize().

Referenced by periodic_optimization(), wmtk::components::wildmeshing(), wildmeshing2d(), and wildmeshing3d().

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write() [2/2]

void wmtk::components::internal::write	(	const std::shared_ptr< Mesh > &	mesh,
		const std::string &	out_dir,
		const std::string &	name,
		const std::string &	vname,
		const int64_t	index,
		const bool	intermediate_output
	)

Definition at line 6 of file wildmeshing_utils.cpp.

References data_dir, wmtk::Edge, wmtk::Tetrahedron, and wmtk::Triangle.